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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7142748 chr14:39872693 T/C LOC647288 chr13:75811890-75814517:- -0.43 -8.3 1.09E-15 Box Plot
THCA rs71428578 chr2:132200345 C/T CCDC74B chr2:130896860-130902707:- 0.4 6.98 9.78E-12 Box Plot
THCA rs7143501 chr14:39925439 G/T LOC647288 chr13:75811890-75814517:- 0.39 7.41 5.75E-13 Box Plot
THCA rs71435648 chr14:39819908 T/TATTA LOC647288 chr13:75811890-75814517:- -0.51 -9.26 7.01E-19 Box Plot
THCA rs71435652 chr14:39833918 G/GT LOC647288 chr13:75811890-75814517:- 0.48 8.55 1.71E-16 Box Plot
THCA rs7143646 chr14:39703498 T/C LOC647288 chr13:75811890-75814517:- -0.43 -7.44 4.75E-13 Box Plot
THCA rs7143942 chr14:39816401 A/T LOC647288 chr13:75811890-75814517:- 0.45 8.33 8.48E-16 Box Plot
THCA rs7144229 chr14:66729277 C/T ATP6V1D chr14:67761088-67826982:- 0.31 6.41 3.46E-10 Box Plot
THCA rs7144848 chr14:39795169 C/T LOC647288 chr13:75811890-75814517:- -0.51 -9.26 6.73E-19 Box Plot
THCA rs7145240 chr14:66708299 A/G ATP6V1D chr14:67761088-67826982:- 0.41 6.99 9.15E-12 Box Plot
THCA rs7145634 chr14:66708529 A/G ATP6V1D chr14:67761088-67826982:- 0.41 6.99 9.15E-12 Box Plot
THCA rs7145821 chr14:39855255 T/C LOC647288 chr13:75811890-75814517:- -0.52 -9.64 3.15E-20 Box Plot
THCA rs7146146 chr14:39795207 T/G LOC647288 chr13:75811890-75814517:- 0.43 8.49 2.59E-16 Box Plot
THCA rs7148150 chr14:39792279 A/G LOC647288 chr13:75811890-75814517:- -0.5 -9.3 5.13E-19 Box Plot
THCA rs7148377 chr14:39910103 G/A LOC647288 chr13:75811890-75814517:- 0.55 11.32 1.79E-26 Box Plot